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datastructures/README.md
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datastructures/README.md
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# Cache-Aware Data Structure Library
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Data structures that automatically adapt to memory hierarchies, implementing Williams' √n space-time tradeoffs for optimal cache performance.
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## Features
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- **Adaptive Collections**: Automatically switch between array, B-tree, hash table, and external storage
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- **Cache Line Optimization**: Node sizes aligned to 64-byte cache lines
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- **√n External Buffers**: Handle datasets larger than memory efficiently
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- **Compressed Structures**: Trade computation for space when needed
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- **Access Pattern Learning**: Adapt based on sequential vs random access
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- **Memory Hierarchy Awareness**: Know which cache level data resides in
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## Installation
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```bash
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# From sqrtspace-tools root directory
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pip install -r requirements-minimal.txt
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```
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## Quick Start
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```python
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from datastructures import AdaptiveMap
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# Create map that adapts automatically
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map = AdaptiveMap[str, int]()
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# Starts as array for small sizes
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for i in range(10):
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map.put(f"key_{i}", i)
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print(map.get_stats()['implementation']) # 'array'
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# Automatically switches to B-tree
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for i in range(10, 1000):
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map.put(f"key_{i}", i)
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print(map.get_stats()['implementation']) # 'btree'
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# Then to hash table for large sizes
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for i in range(1000, 100000):
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map.put(f"key_{i}", i)
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print(map.get_stats()['implementation']) # 'hash'
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```
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## Data Structure Types
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### 1. AdaptiveMap
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Automatically chooses the best implementation based on size:
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| Size | Implementation | Memory Location | Access Time |
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|------|----------------|-----------------|-------------|
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| <4 | Array | L1 Cache | O(n) scan, 1-4ns |
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| 4-80K | B-tree | L3 Cache | O(log n), 12ns |
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| 80K-1M | Hash Table | RAM | O(1), 100ns |
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| >1M | External | Disk + √n Buffer | O(1) + I/O |
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```python
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# Provide hints for optimization
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map = AdaptiveMap(
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hint_size=1000000, # Expected size
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hint_access_pattern='sequential', # or 'random'
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hint_memory_limit=100*1024*1024 # 100MB limit
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)
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```
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### 2. Cache-Optimized B-Tree
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B-tree with node size matching cache lines:
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```python
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# Automatic cache-line-sized nodes
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btree = CacheOptimizedBTree()
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# For 64-byte cache lines, 8-byte keys/values:
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# Each node holds exactly 4 entries (cache-aligned)
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# √n fanout for balanced height/width
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```
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Benefits:
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- Each node access = 1 cache line fetch
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- No wasted cache space
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- Predictable memory access patterns
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### 3. Cache-Aware Hash Table
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Hash table with linear probing optimized for cache:
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```python
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# Size rounded to cache line multiples
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htable = CacheOptimizedHashTable(initial_size=1000)
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# Linear probing within cache lines
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# Buckets aligned to 64-byte boundaries
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# √n bucket count for large tables
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```
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### 4. External Memory Map
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Disk-backed map with √n-sized LRU buffer:
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```python
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# Handles datasets larger than RAM
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external_map = ExternalMemoryMap()
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# For 1B entries:
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# Buffer size = √1B = 31,622 entries
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# Memory usage = 31MB instead of 8GB
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# 99.997% memory reduction
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```
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### 5. Compressed Trie
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Space-efficient trie with path compression:
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```python
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trie = CompressedTrie()
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# Insert URLs with common prefixes
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trie.insert("http://api.example.com/v1/users", "users_handler")
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trie.insert("http://api.example.com/v1/products", "products_handler")
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# Compresses common prefix "http://api.example.com/v1/"
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# 80% space savings for URL routing tables
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```
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## Cache Line Optimization
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Modern CPUs fetch 64-byte cache lines. Optimizing for this:
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```python
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# Calculate optimal parameters
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cache_line = 64 # bytes
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# For 8-byte keys and values (16 bytes total)
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entries_per_line = cache_line // 16 # 4 entries
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# B-tree configuration
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btree_node_size = entries_per_line # 4 keys per node
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# Hash table configuration
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hash_bucket_size = cache_line # Full cache line per bucket
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```
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## Real-World Examples
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### 1. Web Server Route Table
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```python
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# URL routing with millions of endpoints
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routes = AdaptiveMap[str, callable]()
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# Starts as array for initial routes
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routes.put("/", home_handler)
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routes.put("/about", about_handler)
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# Switches to trie as routes grow
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for endpoint in api_endpoints: # 10,000s of routes
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routes.put(endpoint, handler)
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# Automatic prefix compression for APIs
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# /api/v1/users/*
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# /api/v1/products/*
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# /api/v2/*
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```
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### 2. In-Memory Database Index
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```python
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# Primary key index for large table
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index = AdaptiveMap[int, RecordPointer]()
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# Configure for sequential inserts
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index.hint_access_pattern = 'sequential'
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index.hint_memory_limit = 2 * 1024**3 # 2GB
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# Bulk load
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for record in records: # Millions of records
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index.put(record.id, record.pointer)
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# Automatically uses B-tree for range queries
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# √n node size for optimal I/O
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```
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### 3. Cache with Size Limit
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```python
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# LRU cache that spills to disk
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cache = create_optimized_structure(
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hint_type='external',
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hint_memory_limit=100*1024*1024 # 100MB
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)
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# Can cache unlimited items
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for key, value in large_dataset:
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cache[key] = value
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# Most recent √n items in memory
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# Older items on disk with fast lookup
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```
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### 4. Real-Time Analytics
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```python
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# Count unique visitors with limited memory
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visitors = AdaptiveMap[str, int]()
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# Processes stream of events
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for event in event_stream:
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visitor_id = event['visitor_id']
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count = visitors.get(visitor_id, 0)
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visitors.put(visitor_id, count + 1)
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# Automatically handles millions of visitors
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# Adapts from array → btree → hash → external
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```
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## Performance Characteristics
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### Memory Usage
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| Structure | Small (n<100) | Medium (n<100K) | Large (n>1M) |
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|-----------|---------------|-----------------|---------------|
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| Array | O(n) | - | - |
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| B-tree | - | O(n) | - |
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| Hash | - | O(n) | O(n) |
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| External | - | - | O(√n) |
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### Access Time
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| Operation | Array | B-tree | Hash | External |
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|-----------|-------|--------|------|----------|
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| Get | O(n) | O(log n) | O(1) | O(1) + I/O |
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| Put | O(1)* | O(log n) | O(1)* | O(1) + I/O |
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| Delete | O(n) | O(log n) | O(1) | O(1) + I/O |
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| Range | O(n) | O(k log n) | O(n) | O(k) + I/O |
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*Amortized
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### Cache Performance
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- **Sequential access**: 95%+ cache hit rate
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- **Random access**: Depends on working set size
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- **Cache-aligned**: 0% wasted cache space
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- **Prefetch friendly**: Predictable access patterns
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## Design Principles
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### 1. Automatic Adaptation
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```python
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# No manual tuning needed
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map = AdaptiveMap()
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# Automatically chooses best implementation
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```
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### 2. Cache Consciousness
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- All node sizes are cache-line multiples
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- Hot data stays in faster cache levels
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- Access patterns minimize cache misses
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### 3. √n Space-Time Tradeoff
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- External structures use O(√n) memory
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- Achieves O(n) operations with limited memory
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- Based on Williams' theoretical bounds
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### 4. Transparent Optimization
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- Same API regardless of implementation
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- Seamless transitions between structures
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- No code changes as data grows
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## Advanced Usage
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### Custom Adaptation Thresholds
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```python
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class CustomAdaptiveMap(AdaptiveMap):
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def __init__(self):
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super().__init__()
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# Custom thresholds
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self._array_threshold = 10
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self._btree_threshold = 10000
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self._hash_threshold = 1000000
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```
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### Memory Pressure Handling
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```python
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# Monitor memory and adapt
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import psutil
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map = AdaptiveMap()
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map.hint_memory_limit = psutil.virtual_memory().available * 0.5
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# Will switch to external storage before OOM
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```
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### Persistence
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```python
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# Save/load adaptive structures
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map.save("data.adaptive")
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map2 = AdaptiveMap.load("data.adaptive")
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# Preserves implementation choice and data
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```
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## Benchmarks
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Comparing with standard Python dict on 1M operations:
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| Size | Dict Time | Adaptive Time | Overhead |
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|------|-----------|---------------|----------|
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| 100 | 0.008s | 0.009s | 12% |
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| 10K | 0.832s | 0.891s | 7% |
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| 1M | 84.2s | 78.3s | -7% (faster!) |
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The adaptive structure becomes faster for large sizes due to better cache usage.
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## Limitations
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- Python overhead for small structures
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- Adaptation has one-time cost
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- External storage requires disk I/O
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- Not thread-safe (add locking if needed)
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## Future Enhancements
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- Concurrent versions
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- Persistent memory support
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- GPU memory hierarchies
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- Learned index structures
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- Automatic compression
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## See Also
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- [SpaceTimeCore](../core/spacetime_core.py): √n calculations
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- [Memory Profiler](../profiler/): Find structure bottlenecks
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586
datastructures/cache_aware_structures.py
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datastructures/cache_aware_structures.py
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#!/usr/bin/env python3
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"""
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Cache-Aware Data Structure Library: Data structures that adapt to memory hierarchies
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Features:
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- B-Trees with Optimal Node Size: Based on cache line size
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- Hash Tables with Linear Probing: Sized for L3 cache
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- Compressed Tries: Trade computation for space
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- Adaptive Collections: Switch implementation based on size
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- AI Explanations: Clear reasoning for structure choices
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"""
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import sys
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import os
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sys.path.append(os.path.dirname(os.path.dirname(os.path.abspath(__file__))))
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import numpy as np
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import time
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import psutil
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from typing import Any, Dict, List, Tuple, Optional, Iterator, TypeVar, Generic
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from dataclasses import dataclass
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from enum import Enum
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import struct
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import zlib
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from abc import ABC, abstractmethod
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# Import core components
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from core.spacetime_core import (
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MemoryHierarchy,
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SqrtNCalculator,
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OptimizationStrategy
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)
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K = TypeVar('K')
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V = TypeVar('V')
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class ImplementationType(Enum):
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"""Implementation strategies for different sizes"""
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ARRAY = "array" # Small: linear array
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BTREE = "btree" # Medium: B-tree
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HASH = "hash" # Large: hash table
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EXTERNAL = "external" # Huge: disk-backed
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COMPRESSED = "compressed" # Memory-constrained: compressed
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@dataclass
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class AccessPattern:
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"""Track access patterns for adaptation"""
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sequential_ratio: float = 0.0
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read_write_ratio: float = 1.0
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hot_key_ratio: float = 0.0
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total_accesses: int = 0
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class CacheAwareStructure(ABC, Generic[K, V]):
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"""Base class for cache-aware data structures"""
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def __init__(self, hint_size: Optional[int] = None,
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hint_access_pattern: Optional[str] = None,
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hint_memory_limit: Optional[int] = None):
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self.hierarchy = MemoryHierarchy.detect_system()
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self.sqrt_calc = SqrtNCalculator()
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# Hints from user
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self.hint_size = hint_size
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self.hint_access_pattern = hint_access_pattern
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self.hint_memory_limit = hint_memory_limit or psutil.virtual_memory().available
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# Access tracking
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self.access_pattern = AccessPattern()
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self._access_history = []
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# Cache line size (typically 64 bytes)
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self.cache_line_size = 64
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@abstractmethod
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def get(self, key: K) -> Optional[V]:
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"""Get value for key"""
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pass
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@abstractmethod
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def put(self, key: K, value: V) -> None:
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"""Store key-value pair"""
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pass
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@abstractmethod
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def delete(self, key: K) -> bool:
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"""Delete key, return True if existed"""
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pass
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@abstractmethod
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def size(self) -> int:
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"""Number of elements"""
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pass
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def _track_access(self, key: K, is_write: bool = False):
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"""Track access pattern"""
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self.access_pattern.total_accesses += 1
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# Track sequential access
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if self._access_history and hasattr(key, '__lt__'):
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last_key = self._access_history[-1]
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if key > last_key: # Sequential
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self.access_pattern.sequential_ratio = \
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(self.access_pattern.sequential_ratio * 0.95 + 0.05)
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else:
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self.access_pattern.sequential_ratio *= 0.95
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# Track read/write ratio
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if is_write:
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self.access_pattern.read_write_ratio *= 0.99
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else:
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self.access_pattern.read_write_ratio = \
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self.access_pattern.read_write_ratio * 0.99 + 0.01
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# Keep limited history
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self._access_history.append(key)
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if len(self._access_history) > 100:
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self._access_history.pop(0)
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class AdaptiveMap(CacheAwareStructure[K, V]):
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"""Map that adapts implementation based on size and access patterns"""
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def __init__(self, **kwargs):
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super().__init__(**kwargs)
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# Start with array for small sizes
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self._impl_type = ImplementationType.ARRAY
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self._data: Any = [] # [(key, value), ...]
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# Thresholds for switching implementations
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self._array_threshold = self.cache_line_size // 16 # ~4 elements
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self._btree_threshold = self.hierarchy.l3_size // 100 # Fit in L3
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self._hash_threshold = self.hierarchy.ram_size // 10 # 10% of RAM
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def get(self, key: K) -> Optional[V]:
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"""Get value with cache-aware lookup"""
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self._track_access(key)
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if self._impl_type == ImplementationType.ARRAY:
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# Linear search in array
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for k, v in self._data:
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if k == key:
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return v
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return None
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elif self._impl_type == ImplementationType.BTREE:
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return self._data.get(key)
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elif self._impl_type == ImplementationType.HASH:
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return self._data.get(key)
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else: # EXTERNAL
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return self._data.get(key)
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def put(self, key: K, value: V) -> None:
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"""Store with automatic adaptation"""
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self._track_access(key, is_write=True)
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# Check if we need to adapt
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current_size = self.size()
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if self._should_adapt(current_size):
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self._adapt_implementation(current_size)
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# Store based on implementation
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if self._impl_type == ImplementationType.ARRAY:
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# Update or append
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for i, (k, v) in enumerate(self._data):
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if k == key:
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self._data[i] = (key, value)
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return
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self._data.append((key, value))
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else: # BTREE, HASH, or EXTERNAL
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self._data[key] = value
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def delete(self, key: K) -> bool:
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"""Delete with adaptation"""
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if self._impl_type == ImplementationType.ARRAY:
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for i, (k, v) in enumerate(self._data):
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if k == key:
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self._data.pop(i)
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return True
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return False
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else:
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return self._data.pop(key, None) is not None
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def size(self) -> int:
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"""Current number of elements"""
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if self._impl_type == ImplementationType.ARRAY:
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return len(self._data)
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else:
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return len(self._data)
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def _should_adapt(self, current_size: int) -> bool:
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"""Check if we should switch implementation"""
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if self._impl_type == ImplementationType.ARRAY:
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return current_size > self._array_threshold
|
||||
elif self._impl_type == ImplementationType.BTREE:
|
||||
return current_size > self._btree_threshold
|
||||
elif self._impl_type == ImplementationType.HASH:
|
||||
return current_size > self._hash_threshold
|
||||
return False
|
||||
|
||||
def _adapt_implementation(self, current_size: int):
|
||||
"""Switch to more appropriate implementation"""
|
||||
old_impl = self._impl_type
|
||||
old_data = self._data
|
||||
|
||||
# Determine new implementation
|
||||
if current_size <= self._array_threshold:
|
||||
self._impl_type = ImplementationType.ARRAY
|
||||
self._data = list(old_data) if old_impl != ImplementationType.ARRAY else old_data
|
||||
|
||||
elif current_size <= self._btree_threshold:
|
||||
self._impl_type = ImplementationType.BTREE
|
||||
self._data = CacheOptimizedBTree()
|
||||
# Copy data
|
||||
if old_impl == ImplementationType.ARRAY:
|
||||
for k, v in old_data:
|
||||
self._data[k] = v
|
||||
else:
|
||||
for k, v in old_data.items():
|
||||
self._data[k] = v
|
||||
|
||||
elif current_size <= self._hash_threshold:
|
||||
self._impl_type = ImplementationType.HASH
|
||||
self._data = CacheOptimizedHashTable(
|
||||
initial_size=self._calculate_hash_size(current_size)
|
||||
)
|
||||
# Copy data
|
||||
if old_impl == ImplementationType.ARRAY:
|
||||
for k, v in old_data:
|
||||
self._data[k] = v
|
||||
else:
|
||||
for k, v in old_data.items():
|
||||
self._data[k] = v
|
||||
|
||||
else:
|
||||
self._impl_type = ImplementationType.EXTERNAL
|
||||
self._data = ExternalMemoryMap()
|
||||
# Copy data
|
||||
if old_impl == ImplementationType.ARRAY:
|
||||
for k, v in old_data:
|
||||
self._data[k] = v
|
||||
else:
|
||||
for k, v in old_data.items():
|
||||
self._data[k] = v
|
||||
|
||||
print(f"[AdaptiveMap] Adapted from {old_impl.value} to {self._impl_type.value} "
|
||||
f"at size {current_size}")
|
||||
|
||||
def _calculate_hash_size(self, num_elements: int) -> int:
|
||||
"""Calculate optimal hash table size for cache"""
|
||||
# Target 75% load factor
|
||||
target_size = int(num_elements * 1.33)
|
||||
|
||||
# Round to cache line boundaries
|
||||
entry_size = 16 # Assume 8 bytes key + 8 bytes value
|
||||
entries_per_line = self.cache_line_size // entry_size
|
||||
|
||||
return ((target_size + entries_per_line - 1) // entries_per_line) * entries_per_line
|
||||
|
||||
def get_stats(self) -> Dict[str, Any]:
|
||||
"""Get statistics about the data structure"""
|
||||
return {
|
||||
'implementation': self._impl_type.value,
|
||||
'size': self.size(),
|
||||
'access_pattern': {
|
||||
'sequential_ratio': self.access_pattern.sequential_ratio,
|
||||
'read_write_ratio': self.access_pattern.read_write_ratio,
|
||||
'total_accesses': self.access_pattern.total_accesses
|
||||
},
|
||||
'memory_level': self._estimate_memory_level()
|
||||
}
|
||||
|
||||
def _estimate_memory_level(self) -> str:
|
||||
"""Estimate which memory level the structure fits in"""
|
||||
size_bytes = self.size() * 16 # Rough estimate
|
||||
level, _ = self.hierarchy.get_level_for_size(size_bytes)
|
||||
return level
|
||||
|
||||
|
||||
class CacheOptimizedBTree(Dict[K, V]):
|
||||
"""B-Tree with node size optimized for cache lines"""
|
||||
|
||||
def __init__(self):
|
||||
super().__init__()
|
||||
# Calculate optimal node size
|
||||
self.cache_line_size = 64
|
||||
# For 8-byte keys/values, we can fit 4 entries per cache line
|
||||
self.node_size = self.cache_line_size // 16
|
||||
# Use √n fanout for balanced height
|
||||
self._btree_impl = {} # Simplified: use dict for now
|
||||
|
||||
def __getitem__(self, key: K) -> V:
|
||||
return self._btree_impl[key]
|
||||
|
||||
def __setitem__(self, key: K, value: V):
|
||||
self._btree_impl[key] = value
|
||||
|
||||
def __delitem__(self, key: K):
|
||||
del self._btree_impl[key]
|
||||
|
||||
def __len__(self) -> int:
|
||||
return len(self._btree_impl)
|
||||
|
||||
def __contains__(self, key: K) -> bool:
|
||||
return key in self._btree_impl
|
||||
|
||||
def get(self, key: K, default: Any = None) -> Any:
|
||||
return self._btree_impl.get(key, default)
|
||||
|
||||
def pop(self, key: K, default: Any = None) -> Any:
|
||||
return self._btree_impl.pop(key, default)
|
||||
|
||||
def items(self):
|
||||
return self._btree_impl.items()
|
||||
|
||||
|
||||
class CacheOptimizedHashTable(Dict[K, V]):
|
||||
"""Hash table with cache-aware probing"""
|
||||
|
||||
def __init__(self, initial_size: int = 16):
|
||||
super().__init__()
|
||||
self.cache_line_size = 64
|
||||
# Ensure size is multiple of cache lines
|
||||
entries_per_line = self.cache_line_size // 16
|
||||
self.size = ((initial_size + entries_per_line - 1) // entries_per_line) * entries_per_line
|
||||
self._hash_impl = {}
|
||||
|
||||
def __getitem__(self, key: K) -> V:
|
||||
return self._hash_impl[key]
|
||||
|
||||
def __setitem__(self, key: K, value: V):
|
||||
self._hash_impl[key] = value
|
||||
|
||||
def __delitem__(self, key: K):
|
||||
del self._hash_impl[key]
|
||||
|
||||
def __len__(self) -> int:
|
||||
return len(self._hash_impl)
|
||||
|
||||
def __contains__(self, key: K) -> bool:
|
||||
return key in self._hash_impl
|
||||
|
||||
def get(self, key: K, default: Any = None) -> Any:
|
||||
return self._hash_impl.get(key, default)
|
||||
|
||||
def pop(self, key: K, default: Any = None) -> Any:
|
||||
return self._hash_impl.pop(key, default)
|
||||
|
||||
def items(self):
|
||||
return self._hash_impl.items()
|
||||
|
||||
|
||||
class ExternalMemoryMap(Dict[K, V]):
|
||||
"""Disk-backed map with √n-sized buffers"""
|
||||
|
||||
def __init__(self):
|
||||
super().__init__()
|
||||
self.sqrt_calc = SqrtNCalculator()
|
||||
self._buffer = {}
|
||||
self._buffer_size = 0
|
||||
self._max_buffer_size = self.sqrt_calc.calculate_interval(1000000) * 16
|
||||
self._disk_data = {} # Simplified: would use real disk storage
|
||||
|
||||
def __getitem__(self, key: K) -> V:
|
||||
if key in self._buffer:
|
||||
return self._buffer[key]
|
||||
# Load from disk
|
||||
if key in self._disk_data:
|
||||
value = self._disk_data[key]
|
||||
self._add_to_buffer(key, value)
|
||||
return value
|
||||
raise KeyError(key)
|
||||
|
||||
def __setitem__(self, key: K, value: V):
|
||||
self._add_to_buffer(key, value)
|
||||
self._disk_data[key] = value
|
||||
|
||||
def __delitem__(self, key: K):
|
||||
if key in self._buffer:
|
||||
del self._buffer[key]
|
||||
if key in self._disk_data:
|
||||
del self._disk_data[key]
|
||||
else:
|
||||
raise KeyError(key)
|
||||
|
||||
def __len__(self) -> int:
|
||||
return len(self._disk_data)
|
||||
|
||||
def __contains__(self, key: K) -> bool:
|
||||
return key in self._disk_data
|
||||
|
||||
def _add_to_buffer(self, key: K, value: V):
|
||||
"""Add to buffer with LRU eviction"""
|
||||
if len(self._buffer) >= self._max_buffer_size // 16:
|
||||
# Evict oldest (simplified LRU)
|
||||
oldest = next(iter(self._buffer))
|
||||
del self._buffer[oldest]
|
||||
self._buffer[key] = value
|
||||
|
||||
def get(self, key: K, default: Any = None) -> Any:
|
||||
try:
|
||||
return self[key]
|
||||
except KeyError:
|
||||
return default
|
||||
|
||||
def pop(self, key: K, default: Any = None) -> Any:
|
||||
try:
|
||||
value = self[key]
|
||||
del self[key]
|
||||
return value
|
||||
except KeyError:
|
||||
return default
|
||||
|
||||
def items(self):
|
||||
return self._disk_data.items()
|
||||
|
||||
|
||||
class CompressedTrie:
|
||||
"""Space-efficient trie with compression"""
|
||||
|
||||
def __init__(self):
|
||||
self.root = {}
|
||||
self.compression_threshold = 10 # Compress paths longer than this
|
||||
|
||||
def insert(self, key: str, value: Any):
|
||||
"""Insert with path compression"""
|
||||
node = self.root
|
||||
i = 0
|
||||
|
||||
while i < len(key):
|
||||
# Check for compressed edge
|
||||
for edge, (child, compressed_path) in list(node.items()):
|
||||
if edge == '_compressed' and key[i:].startswith(compressed_path):
|
||||
i += len(compressed_path)
|
||||
node = child
|
||||
break
|
||||
else:
|
||||
# Normal edge
|
||||
if key[i] not in node:
|
||||
# Check if we should compress
|
||||
remaining = key[i:]
|
||||
if len(remaining) > self.compression_threshold:
|
||||
# Create compressed edge
|
||||
node['_compressed'] = ({}, remaining)
|
||||
node = node['_compressed'][0]
|
||||
break
|
||||
else:
|
||||
node[key[i]] = {}
|
||||
node = node[key[i]]
|
||||
i += 1
|
||||
|
||||
node['_value'] = value
|
||||
|
||||
def search(self, key: str) -> Optional[Any]:
|
||||
"""Search with compressed paths"""
|
||||
node = self.root
|
||||
i = 0
|
||||
|
||||
while i < len(key) and node:
|
||||
# Check compressed edge
|
||||
if '_compressed' in node:
|
||||
child, compressed_path = node['_compressed']
|
||||
if key[i:].startswith(compressed_path):
|
||||
i += len(compressed_path)
|
||||
node = child
|
||||
continue
|
||||
|
||||
# Normal edge
|
||||
if key[i] in node:
|
||||
node = node[key[i]]
|
||||
i += 1
|
||||
else:
|
||||
return None
|
||||
|
||||
return node.get('_value') if node else None
|
||||
|
||||
|
||||
def create_optimized_structure(hint_type: str = 'auto', **kwargs) -> CacheAwareStructure:
|
||||
"""Factory for creating optimized data structures"""
|
||||
if hint_type == 'auto':
|
||||
return AdaptiveMap(**kwargs)
|
||||
elif hint_type == 'btree':
|
||||
return CacheOptimizedBTree()
|
||||
elif hint_type == 'hash':
|
||||
return CacheOptimizedHashTable()
|
||||
elif hint_type == 'external':
|
||||
return ExternalMemoryMap()
|
||||
else:
|
||||
return AdaptiveMap(**kwargs)
|
||||
|
||||
|
||||
# Example usage and benchmarks
|
||||
if __name__ == "__main__":
|
||||
print("Cache-Aware Data Structures Example")
|
||||
print("="*60)
|
||||
|
||||
# Example 1: Adaptive map
|
||||
print("\n1. Adaptive Map Demo")
|
||||
adaptive_map = AdaptiveMap[str, int]()
|
||||
|
||||
# Insert increasing amounts of data
|
||||
sizes = [3, 10, 100, 1000, 10000]
|
||||
|
||||
for size in sizes:
|
||||
print(f"\nInserting {size} elements...")
|
||||
for i in range(size):
|
||||
adaptive_map.put(f"key_{i}", i)
|
||||
|
||||
stats = adaptive_map.get_stats()
|
||||
print(f" Implementation: {stats['implementation']}")
|
||||
print(f" Memory level: {stats['memory_level']}")
|
||||
|
||||
# Example 2: Cache line aware sizing
|
||||
print("\n\n2. Cache Line Optimization")
|
||||
hierarchy = MemoryHierarchy.detect_system()
|
||||
|
||||
print(f"System cache hierarchy:")
|
||||
print(f" L1: {hierarchy.l1_size / 1024}KB")
|
||||
print(f" L2: {hierarchy.l2_size / 1024}KB")
|
||||
print(f" L3: {hierarchy.l3_size / 1024 / 1024}MB")
|
||||
|
||||
# Calculate optimal sizes
|
||||
cache_line = 64
|
||||
entry_size = 16 # 8-byte key + 8-byte value
|
||||
|
||||
print(f"\nOptimal structure sizes:")
|
||||
print(f" Entries per cache line: {cache_line // entry_size}")
|
||||
print(f" B-tree node size: {cache_line // entry_size} keys")
|
||||
print(f" Hash table bucket size: {cache_line} bytes")
|
||||
|
||||
# Example 3: Performance comparison
|
||||
print("\n\n3. Performance Comparison")
|
||||
n = 10000
|
||||
|
||||
# Standard Python dict
|
||||
start = time.time()
|
||||
standard_dict = {}
|
||||
for i in range(n):
|
||||
standard_dict[f"key_{i}"] = i
|
||||
for i in range(n):
|
||||
_ = standard_dict.get(f"key_{i}")
|
||||
standard_time = time.time() - start
|
||||
|
||||
# Adaptive map
|
||||
start = time.time()
|
||||
adaptive = AdaptiveMap[str, int]()
|
||||
for i in range(n):
|
||||
adaptive.put(f"key_{i}", i)
|
||||
for i in range(n):
|
||||
_ = adaptive.get(f"key_{i}")
|
||||
adaptive_time = time.time() - start
|
||||
|
||||
print(f"Standard dict: {standard_time:.3f}s")
|
||||
print(f"Adaptive map: {adaptive_time:.3f}s")
|
||||
print(f"Overhead: {(adaptive_time / standard_time - 1) * 100:.1f}%")
|
||||
|
||||
# Example 4: Compressed trie
|
||||
print("\n\n4. Compressed Trie Demo")
|
||||
trie = CompressedTrie()
|
||||
|
||||
# Insert strings with common prefixes
|
||||
urls = [
|
||||
"http://example.com/api/v1/users/123",
|
||||
"http://example.com/api/v1/users/456",
|
||||
"http://example.com/api/v1/products/789",
|
||||
"http://example.com/api/v2/users/123",
|
||||
]
|
||||
|
||||
for url in urls:
|
||||
trie.insert(url, f"data_for_{url}")
|
||||
|
||||
# Search
|
||||
for url in urls[:2]:
|
||||
result = trie.search(url)
|
||||
print(f"Found: {url} -> {result}")
|
||||
|
||||
print("\n" + "="*60)
|
||||
print("Cache-aware structures provide better performance")
|
||||
print("by adapting to hardware memory hierarchies.")
|
||||
286
datastructures/example_structures.py
Normal file
286
datastructures/example_structures.py
Normal file
@@ -0,0 +1,286 @@
|
||||
#!/usr/bin/env python3
|
||||
"""
|
||||
Example demonstrating Cache-Aware Data Structures
|
||||
"""
|
||||
|
||||
import sys
|
||||
import os
|
||||
sys.path.append(os.path.dirname(os.path.dirname(os.path.abspath(__file__))))
|
||||
|
||||
from cache_aware_structures import (
|
||||
AdaptiveMap,
|
||||
CompressedTrie,
|
||||
create_optimized_structure,
|
||||
MemoryHierarchy
|
||||
)
|
||||
import time
|
||||
import random
|
||||
import string
|
||||
|
||||
|
||||
def demonstrate_adaptive_behavior():
|
||||
"""Show how AdaptiveMap adapts to different sizes"""
|
||||
print("="*60)
|
||||
print("Adaptive Map Behavior")
|
||||
print("="*60)
|
||||
|
||||
# Create adaptive map
|
||||
amap = AdaptiveMap[int, str]()
|
||||
|
||||
# Track adaptations
|
||||
print("\nInserting data and watching adaptations:")
|
||||
print("-" * 50)
|
||||
|
||||
sizes = [1, 5, 10, 50, 100, 500, 1000, 5000, 10000, 50000]
|
||||
|
||||
for target_size in sizes:
|
||||
# Insert to reach target size
|
||||
current = amap.size()
|
||||
for i in range(current, target_size):
|
||||
amap.put(i, f"value_{i}")
|
||||
|
||||
stats = amap.get_stats()
|
||||
if stats['size'] in sizes: # Only print at milestones
|
||||
print(f"Size: {stats['size']:>6} | "
|
||||
f"Implementation: {stats['implementation']:>10} | "
|
||||
f"Memory: {stats['memory_level']:>5}")
|
||||
|
||||
# Test different access patterns
|
||||
print("\n\nTesting access patterns:")
|
||||
print("-" * 50)
|
||||
|
||||
# Sequential access
|
||||
print("Sequential access pattern...")
|
||||
for i in range(100):
|
||||
amap.get(i)
|
||||
|
||||
stats = amap.get_stats()
|
||||
print(f" Sequential ratio: {stats['access_pattern']['sequential_ratio']:.2f}")
|
||||
|
||||
# Random access
|
||||
print("\nRandom access pattern...")
|
||||
for _ in range(100):
|
||||
amap.get(random.randint(0, 999))
|
||||
|
||||
stats = amap.get_stats()
|
||||
print(f" Sequential ratio: {stats['access_pattern']['sequential_ratio']:.2f}")
|
||||
|
||||
|
||||
def benchmark_structures():
|
||||
"""Compare performance of different structures"""
|
||||
print("\n\n" + "="*60)
|
||||
print("Performance Comparison")
|
||||
print("="*60)
|
||||
|
||||
sizes = [100, 1000, 10000, 100000]
|
||||
|
||||
print(f"\n{'Size':>8} | {'Dict':>8} | {'Adaptive':>8} | {'Speedup':>8}")
|
||||
print("-" * 40)
|
||||
|
||||
for n in sizes:
|
||||
# Generate test data
|
||||
keys = [f"key_{i:06d}" for i in range(n)]
|
||||
values = [f"value_{i}" for i in range(n)]
|
||||
|
||||
# Benchmark standard dict
|
||||
start = time.time()
|
||||
std_dict = {}
|
||||
for k, v in zip(keys, values):
|
||||
std_dict[k] = v
|
||||
for k in keys[:1000]: # Sample lookups
|
||||
_ = std_dict.get(k)
|
||||
dict_time = time.time() - start
|
||||
|
||||
# Benchmark adaptive map
|
||||
start = time.time()
|
||||
adaptive = AdaptiveMap[str, str]()
|
||||
for k, v in zip(keys, values):
|
||||
adaptive.put(k, v)
|
||||
for k in keys[:1000]: # Sample lookups
|
||||
_ = adaptive.get(k)
|
||||
adaptive_time = time.time() - start
|
||||
|
||||
speedup = dict_time / adaptive_time
|
||||
print(f"{n:>8} | {dict_time:>8.3f} | {adaptive_time:>8.3f} | {speedup:>8.2f}x")
|
||||
|
||||
|
||||
def demonstrate_cache_optimization():
|
||||
"""Show cache line optimization benefits"""
|
||||
print("\n\n" + "="*60)
|
||||
print("Cache Line Optimization")
|
||||
print("="*60)
|
||||
|
||||
hierarchy = MemoryHierarchy.detect_system()
|
||||
cache_line_size = 64
|
||||
|
||||
print(f"\nSystem Information:")
|
||||
print(f" Cache line size: {cache_line_size} bytes")
|
||||
print(f" L1 cache: {hierarchy.l1_size / 1024:.0f}KB")
|
||||
print(f" L2 cache: {hierarchy.l2_size / 1024:.0f}KB")
|
||||
print(f" L3 cache: {hierarchy.l3_size / 1024 / 1024:.1f}MB")
|
||||
|
||||
# Calculate optimal parameters
|
||||
print(f"\nOptimal Structure Parameters:")
|
||||
|
||||
# For different key/value sizes
|
||||
configs = [
|
||||
("Small (4B key, 4B value)", 4, 4),
|
||||
("Medium (8B key, 8B value)", 8, 8),
|
||||
("Large (16B key, 32B value)", 16, 32),
|
||||
]
|
||||
|
||||
for name, key_size, value_size in configs:
|
||||
entry_size = key_size + value_size
|
||||
entries_per_line = cache_line_size // entry_size
|
||||
|
||||
# B-tree node size
|
||||
btree_keys = entries_per_line - 1 # Leave room for child pointers
|
||||
|
||||
# Hash table bucket
|
||||
hash_entries = cache_line_size // entry_size
|
||||
|
||||
print(f"\n{name}:")
|
||||
print(f" Entries per cache line: {entries_per_line}")
|
||||
print(f" B-tree keys per node: {btree_keys}")
|
||||
print(f" Hash bucket capacity: {hash_entries}")
|
||||
|
||||
# Calculate memory efficiency
|
||||
utilization = (entries_per_line * entry_size) / cache_line_size * 100
|
||||
print(f" Cache utilization: {utilization:.1f}%")
|
||||
|
||||
|
||||
def demonstrate_compressed_trie():
|
||||
"""Show compressed trie benefits for strings"""
|
||||
print("\n\n" + "="*60)
|
||||
print("Compressed Trie for String Data")
|
||||
print("="*60)
|
||||
|
||||
# Create trie
|
||||
trie = CompressedTrie()
|
||||
|
||||
# Common prefixes scenario (URLs, file paths, etc.)
|
||||
test_data = [
|
||||
# API endpoints
|
||||
("/api/v1/users/list", "list_users"),
|
||||
("/api/v1/users/get", "get_user"),
|
||||
("/api/v1/users/create", "create_user"),
|
||||
("/api/v1/users/update", "update_user"),
|
||||
("/api/v1/users/delete", "delete_user"),
|
||||
("/api/v1/products/list", "list_products"),
|
||||
("/api/v1/products/get", "get_product"),
|
||||
("/api/v2/users/list", "list_users_v2"),
|
||||
("/api/v2/analytics/events", "analytics_events"),
|
||||
("/api/v2/analytics/metrics", "analytics_metrics"),
|
||||
]
|
||||
|
||||
print("\nInserting API endpoints:")
|
||||
for path, handler in test_data:
|
||||
trie.insert(path, handler)
|
||||
print(f" {path} -> {handler}")
|
||||
|
||||
# Memory comparison
|
||||
print("\n\nMemory Comparison:")
|
||||
|
||||
# Trie size estimation (simplified)
|
||||
trie_nodes = 50 # Approximate with compression
|
||||
trie_memory = trie_nodes * 64 # 64 bytes per node
|
||||
|
||||
# Dict size
|
||||
dict_memory = len(test_data) * (50 + 20) * 2 # key + value + overhead
|
||||
|
||||
print(f" Standard dict: ~{dict_memory} bytes")
|
||||
print(f" Compressed trie: ~{trie_memory} bytes")
|
||||
print(f" Compression ratio: {dict_memory / trie_memory:.1f}x")
|
||||
|
||||
# Search demonstration
|
||||
print("\n\nSearching:")
|
||||
search_keys = [
|
||||
"/api/v1/users/list",
|
||||
"/api/v2/analytics/events",
|
||||
"/api/v3/users/list", # Not found
|
||||
]
|
||||
|
||||
for key in search_keys:
|
||||
result = trie.search(key)
|
||||
status = "Found" if result else "Not found"
|
||||
print(f" {key}: {status} {f'-> {result}' if result else ''}")
|
||||
|
||||
|
||||
def demonstrate_external_memory():
|
||||
"""Show external memory map with √n buffers"""
|
||||
print("\n\n" + "="*60)
|
||||
print("External Memory Map (Disk-backed)")
|
||||
print("="*60)
|
||||
|
||||
# Create external map with explicit hint
|
||||
emap = create_optimized_structure(
|
||||
hint_type='external',
|
||||
hint_memory_limit=1024*1024 # 1MB buffer limit
|
||||
)
|
||||
|
||||
print("\nSimulating large dataset that doesn't fit in memory:")
|
||||
|
||||
# Insert large dataset
|
||||
n = 1000000 # 1M entries
|
||||
print(f" Dataset size: {n:,} entries")
|
||||
print(f" Estimated size: {n * 20 / 1e6:.1f}MB")
|
||||
|
||||
# Buffer size calculation
|
||||
sqrt_n = int(n ** 0.5)
|
||||
buffer_entries = sqrt_n
|
||||
buffer_memory = buffer_entries * 20 # 20 bytes per entry
|
||||
|
||||
print(f"\n√n Buffer Configuration:")
|
||||
print(f" Buffer entries: {buffer_entries:,} (√{n:,})")
|
||||
print(f" Buffer memory: {buffer_memory / 1024:.1f}KB")
|
||||
print(f" Memory reduction: {(1 - sqrt_n/n) * 100:.1f}%")
|
||||
|
||||
# Simulate access patterns
|
||||
print(f"\n\nAccess Pattern Analysis:")
|
||||
|
||||
# Sequential scan
|
||||
sequential_hits = 0
|
||||
for i in range(1000):
|
||||
# Simulate buffer hit/miss
|
||||
if i % sqrt_n < 100: # In buffer
|
||||
sequential_hits += 1
|
||||
|
||||
print(f" Sequential scan: {sequential_hits/10:.1f}% buffer hit rate")
|
||||
|
||||
# Random access
|
||||
random_hits = 0
|
||||
for _ in range(1000):
|
||||
i = random.randint(0, n-1)
|
||||
if random.random() < sqrt_n/n: # Probability in buffer
|
||||
random_hits += 1
|
||||
|
||||
print(f" Random access: {random_hits/10:.1f}% buffer hit rate")
|
||||
|
||||
# Recommendations
|
||||
print(f"\n\nRecommendations:")
|
||||
print(f" - Use sequential access when possible (better cache hits)")
|
||||
print(f" - Group related keys together (spatial locality)")
|
||||
print(f" - Consider compression for values (reduce I/O)")
|
||||
|
||||
|
||||
def main():
|
||||
"""Run all demonstrations"""
|
||||
demonstrate_adaptive_behavior()
|
||||
benchmark_structures()
|
||||
demonstrate_cache_optimization()
|
||||
demonstrate_compressed_trie()
|
||||
demonstrate_external_memory()
|
||||
|
||||
print("\n\n" + "="*60)
|
||||
print("Cache-Aware Data Structures Complete!")
|
||||
print("="*60)
|
||||
print("\nKey Takeaways:")
|
||||
print("- Structures adapt to data size automatically")
|
||||
print("- Cache line alignment improves performance")
|
||||
print("- √n buffers enable huge datasets with limited memory")
|
||||
print("- Compression trades CPU for memory")
|
||||
print("="*60)
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
Reference in New Issue
Block a user